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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015838837.1_cds_XP_016507097.1_20257
CDS Infomation

[gene=LOC107824804] [db_xref=GeneID:107824804] [protein=IQ domain-containing protein IQM2-like] [protein_id=XP_016507097.1] [location=complement(join(41529..42287,42366..42467,42568..42807,42916..43006,43094..43182,43270..43335,43431..43545,43635..44068))] [gbkey=CDS]
Sequence

ATGGGGTTATCCTTTTCATGCCCACTTGCCTCTCATAGTGATTTGGAAACTGCCCTTGAA
TCTGTCATTGTGAAATCCATCGATTTTGGATACGATGAGGGAAAGACGCCACTACGATCA
GTTAGCTTCAAGAGCCAAGATACAGAACCAAAAATATTGCAATCGGATGGCTTTGGAAAG
ATGTCGATAGAAAAAACTGTCAGCTTTAGGACAATGGAAAATGCAATGGAGTTTAGTAAA
ACTTCATCAGAAGAGAAGCACGAGTTTAACGAGTTTCGTAGGTTAGACAGCAGGAATGGA
GAGTCTCCTAAATCTCCTCTAGTATTTACAAGCAGCCCCAAACACGAGGCAGCTTTAAAG
TTGCAGAAAGTGTATAAGAGCTTTAGGACTAGAAGAAAATTAGCAGACTGTGCAGTACTT
ATAGAGCAAAGCTGGTGGAAGCTATTAGATTTTGTAGAACTCAAGCATAGTTCTATTTCA
TTTTTTGATCTTGATAAACACGAGACAGCAGTTTCACGTTGGTCGAGGGCAAGAACTAGA
GCAGCCAAGGTTGGCAAAGGCTTATCTAAAAATGGTAAAGCCCAGAAATTAGCGTTACAA
CACTGGCTGGAAGCTATTGACCCACGACATCGTTATGGACACAACTTGCATTTCTATTAT
GTCCAATGGCTGCATTCTCAAAGCAAAGAGCCATTCTTCTACTGGTTGGATATTGGAGAA
GGAAAAGAAGTGAATATTGTTGACAAATGCCCTCGATGGAAACTTCAGCAGCAGTGTATT
AAATACCTTGGTCCGATGGAAAGAAAGGCTTATGAAGTTGAAGTGCAAGATGGGAAGCTC
TTGTACAAGGAAACAGGGAAGCTCCTTAACACTACCATTGAACCAAAAGGCGCTAAGTGG
ATTTTTGTCCTCAGCACCTCTAAAACCTTATATGTTGGCAAGAAAACGAAAGGTACATTT
CAGCACTCTAGTTTCTTGGCTGGTGGAGCCACATTAGCGGCTGGGAGAATAGTTGCCGAA
CAAGGAGTATTGAAGGCTGTCTGGCCTCATAGTGGACATTACCGACCTACCCCAGAAAAC
TTCCAGGACTTTGTTTCATTCATGAGGGAGAACAATGTCGACCTCAATGATGTTAAGCTT
GATTCCGACGAAGATGAGGAAGAATCCATTGGCAAGAAGAGTGGTGTTTTCCTCAGAGGC
AACTCTTCTGAGGATGACTTGCTAAAAGATGTTTTGGAGACGGAAGCGAATGATTTAGAA
GAGTCAACTTCAGAGAAAAGTGACTTAAAACTACAAGAGAATGCTGCTGATATACAACTA
TCCGATTCAAAACCATCTCATAGCTTCGGTAGCAAATTGACTAATCTTCAAATTCCAAGC
AATGATGATTTCTTACAGAAATTAAAGAATGAAAGTGAAGCTGCTAAATCTATTTCCAAC
TCCTTCTCATTAGAATCACCGTCAGACGGATATGAAACAGCAGAAGAATTGTTTGTTCCT
GAAAAAGATCAAACGGATTTAGAACACGAAGAGCTCGAGGAAAGTAAAGAAGAGATAATT
CCAGAAGAATCTATTATCCAAAGGATAAATTCACACAAAGATCTTAAATCATATCAGTTG
GGAAAGCAACTGTCTTGCAAATGGAGCACAGGAGCTGGACCTCGAATCGGATGCTTGAGG
GATTATCCCTCGCAGCTTCAATCCCATGCTTTAGAACAAGTGAGCTTGTCCCCGAGAAGT
GCTACGCGTCTCAAGATGAACTTCCCTTCGAGGGCATCAACGCCAACGAGCTTCAGCAGG
GTAATGCAGGTTTCCTGTTCCCTTTCTCCTCTGGGGAACAAGACTTTATCTTGCCTCAGT
AGCAGATATTCCTCTCCTCCATATAAAGGACCCTAA

Peptide Sequence

PEP ID

XP_016507097.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM2-like [Nicotiana tabacum]
Sequence

MGLSFSCPLASHSDLETALESVIVKSIDFGYDEGKTPLRSVSFKSQDTEPKILQSDGFGK
MSIEKTVSFRTMENAMEFSKTSSEEKHEFNEFRRLDSRNGESPKSPLVFTSSPKHEAALK
LQKVYKSFRTRRKLADCAVLIEQSWWKLLDFVELKHSSISFFDLDKHETAVSRWSRARTR
AAKVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLHFYYVQWLHSQSKEPFFYWLDIGE
GKEVNIVDKCPRWKLQQQCIKYLGPMERKAYEVEVQDGKLLYKETGKLLNTTIEPKGAKW
IFVLSTSKTLYVGKKTKGTFQHSSFLAGGATLAAGRIVAEQGVLKAVWPHSGHYRPTPEN
FQDFVSFMRENNVDLNDVKLDSDEDEEESIGKKSGVFLRGNSSEDDLLKDVLETEANDLE
ESTSEKSDLKLQENAADIQLSDSKPSHSFGSKLTNLQIPSNDDFLQKLKNESEAAKSISN
SFSLESPSDGYETAEELFVPEKDQTDLEHEELEESKEEIIPEESIIQRINSHKDLKSYQL
GKQLSCKWSTGAGPRIGCLRDYPSQLQSHALEQVSLSPRSATRLKMNFPSRASTPTSFSR
VMQVSCSLSPLGNKTLSCLSSRYSSPPYKGP

Transcript Sequence

Gene sequence data has not been registered.